Understanding the Four Molecules of Life: Building Blocks Explained
Introduction to the Molecules of Life
Life is fundamentally built from the food we consume, which breaks down into building blocks that form living organisms. For example, proteins in food break down into amino acids, sugars into cellular energy, and fats into lipids for cell membranes.
Why Carbon is Central to Life
- Carbon has four valence electrons, allowing it to form stable, large molecules.
- Life is carbon-based because carbon forms stable bonds essential for complex molecules.
- Silicon is a theoretical alternative for life’s basis, as depicted in science fiction.
Functional Groups: The Chemical Behavior of Molecules
Functional groups attach to carbon chains and determine molecule behavior:
- Carboxyl Group (COOH): Donates hydrogen ions, forms carboxylic acids.
- Carbonyl Group (C=O): Ketones (middle) or aldehydes (end of chain).
- Methyl Group (CH3): Important in DNA methylation, affecting gene expression.
- Amino Group (NH2): Contains nitrogen, essential for amino acids.
- Phosphate Group (PO4): Key in energy transfer (ATP) and DNA structure.
- Hydroxy Group (OH): Makes molecules polar and soluble in water.
Polymers and Monomers: Building Life’s Macromolecules
- Polymers are large molecules made from repeating monomers.
- Four major biological polymers: nucleic acids, proteins, lipids, carbohydrates.
- Polymers form via dehydration synthesis (removal of water).
- Polymers break down via hydrolysis (addition of water).
The Four Major Macromolecules
1. Nucleic Acids
- DNA and RNA store and transmit genetic information.
- Built from nucleotides (base, sugar, phosphate).
- Formed by dehydration reactions linking nucleotides. For more on this, see Understanding the Four Major Biomolecules: Carbohydrates, Lipids, Proteins, and Nucleic Acids.
2. Proteins
- Made from 20 different amino acids, each with a unique side chain (R group).
- Amino acids have amino and carboxyl groups.
- Proteins fold into complex 3D shapes based on amino acid sequence.
- Structure levels include primary, secondary (alpha helices), tertiary, and quaternary. For a deeper dive into proteins, check out Understanding Biomolecules: A Comprehensive Guide.
3. Lipids
- Composed mainly of hydrocarbons (carbon and hydrogen).
- Include fats (triglycerides), phospholipids (cell membranes), and cholesterol.
- Fatty acids can be saturated (straight chains) or unsaturated (with double bonds causing bends).
- Saturated fats are solid at room temperature; unsaturated fats are liquid.
4. Carbohydrates
- Include monosaccharides (e.g., glucose), disaccharides (e.g., sucrose), and polysaccharides (e.g., starch).
- Polysaccharides are long chains of sugar molecules linked by covalent bonds.
- Broken down by hydrolysis to release sugars for energy. For more on the chemistry behind these processes, see Understanding Chemical Formulas: Types, Ratios, and Structures Explained.
Summary
Understanding these four molecules and their building blocks explains how food transforms into the living matter that composes organisms. The processes of dehydration synthesis and hydrolysis are fundamental to building and breaking down these macromolecules, highlighting the dynamic nature of life’s chemistry. For a broader context, you may also find Understanding Biochemistry: The Essential Study of Biological Molecules and Life Structures helpful.
[Music] hi it's Mr Anderson and this podcast I'm going to talk about the molecules of
Life the first time I learned this I was pretty amazed but basically the way the world works is that we eat food and then
the building blocks of that food we weave together make to make living things and so this right here is called
a Dave Thomas Dave Thomas is the founder of Wendy's but Dave Thomas and his body was made up of building blocks that came
from the food that he created in other words the proteins in the burger are broken down into amino acids and those
make the proteins in him or the sugars in the carbohydrates of the bun are broken down to make sugars that is used
in cellular respiration to make ATP to move the materials inside him or the fat inside the burger is used to make the
lipids inside the cell membranes of Dave Thomas he's actually a really fascinating guy when I read about him a
little bit didn't know this but he worked for Colonel Sanders in KFC so it's worth studying the Wikipedia a
little bit on Dave Thomas also a war hero so cool but basically um life is built on carbon and the reason life is
built on carbon is that carbon has four veence electrons in other words it has six protons that means it has six
electrons and two electrons in the first level but it has one electron in each of these if you were to draw a Lewis Dot
Diagram one of these in each of those uh outer veent shells and so basically it's really good at bonding and so the reason
life is made up of carbon is because it's fairly makes fairly stable large carbon-based molecules and that's what
we are uh if it weren't carbon then maybe it would be silicon which sits right below this I remember watching the
Star Trek episode way back in the day where there were these giant uh Rock animals called the horta and basically
this right here is Spock mind melding with a horta uh but based in Silicon and so if we were to find life somewhere out
there in the planet maybe silica would be an example of that and my computer is made up of silicon which is about as
close to Life as we have on our planet so the first thing you should understand is the idea of what a functional group
is so life is made up of carbon these huge carbon chains that's what DNA is pretty much made up of carbon and
hydrogen but there are things around the outside there are called functional groups and those give functionality they
give um Behavior to the chemicals and so if we go through these starting with the first one this would be a carboxy group
there's going to be a carbon right here at the middle and so we could abbreviate a carboxy
group by just writing Co but basically a carboxy group is going to donate this hydrogen ion and so it will make things
that are carboxilic acid this carboxy group and the amino group actually form amino acids uh next one would be the
carbonal group uh carbonal group has a carbon right here if it's in the middle we call it a ketone at the end it's
called an alide so felhide would be an example of that uh this would be a methyl group a methyl group is going to
be a carbon with three hydrogens around the outside of it methyl groups would be important in methylation so basically
what they can do DNA would be a great example of that is they can methylate organ uh uh these big carbon compounds
make them nonfunctional amino group would be another one the amino group is going to have an nh2 so it's got
nitrogen and we need nitrogen to survive and the reason we need nitrogen is to make amino acids and then basically an
amino acid which is the building block of proteins are made up of carboxy group and amino group uh next one would be the
phosphate phosphate you you may know this it's actually what's on the end of ATP it's what we use for energy transfer
uh also it's used to build DNA for example so transfer of energy would be a phosphate group and then finally we have
the hydroxy group hydroxy group is going to be an O uh what that does is make it polar and so it makes it readily
dissolvable and so if you learn these six in biology just what they are that you're going to see even in this
presentation that they're going to start showing up and you can predict some of the properties so Amino groups will
don't it'll grab onto hydrogen ion become bases um and so there's a lot of things you can learn from functional
groups but the first thing you want to do is simply memorize them now we get to the actual molecules of Life which are
mostly polymers now know this that the polymers are made up of monomers and so monomers are the building blocks and
polymers are these large macro molecules and there's only four in biology that you have to learn so it's pretty easy
but those polymers are built through a process called dehydration so if we look right here this is one amino acid and
this is another amino acid you could see right here again that there's an amino group on this side there's a carboxy
group on that side but basically if we look right here in the middle if we have two amino acids right next to each other
if I were to remove just this section right here it's an oxygen and two hydrogens what am I removing I'm
removing H2O and that's called water and so we call that a dehydration reaction because you're removing water just like
when you're dehydrated you're you don't have enough water so you remove that water and we form a Cove valent bond in
the middle that would be a peptide bond and so the proteins inside my hair and my nails and my skin and all of that is
made up of amino acids that are attached together each time we attach to amino acids we got a lose of water likewise if
we want to break it apart so let's say I eat a burger one of those Wendy's burgers and I want to break down the
proteins and then make amino acids out of it um that I can use inside my body what would be the reaction there that's
called hydrolysis so hydrolysis now is hydro water Lis means to break and so we're adding a water here in the middle
and we're breaking that Bond apart and so now we have two amino acids and so how do you build proteins through
dehydration reaction how do you break them down hydrolysis how do you build nucleic acids like DNA dehydration
reaction how do you break it down you're going to do that through hydrolysis and so even carbohydrates same way and so
let's get to those four major macro molecules the first one is going to be called nucleic acids nucleic acids the
two big ones you should understand are RNA and DNA DNA stores information inside the cell RNA is kind of a slave
to the DNA but it does work so these right here would be polymers large macro molecules what are the building blocks
it's going to be these nucleotides and so this would be a nucleotide that builds this would be one that builds DNA
so it's got a base of sugar and a phosphate and so we simply attach these over and over and over again and so it
would fit right in here and that would be one nucleotide so we attach them over and over and over again again we do that
through a dehydration reaction and eventually you have DNA so where do we get our DNA we eat our food and we break
it down into monomers and then we can weave that back into the stuff of life if we go to proteins proteins again are
made up of amino acids again here's that amino group right here would be the carboxy group right here in the middle
of an amino acid we have a carbon and a hydrogen and then on the side we have a r or side chain and so basically this is
going to be different in every amino acid and so just like we have 26 letters that make all the words in our alphabet
there are only 20 amino acids that humans need to survive and these are all 20 amino acids and if you look at them
don't memorize them that'd be silly but if you look at them what you'll see is here it is here's our carboxy group our
amino group and all of them have carboxy Amino carboxy Amino but if you look on the side this r or side chain is going
to be different in every amino acid so this would be one side chain that'd be another side chain that'd be another
side chain and we have a few properties so like these ones would all be positive these ones would be negative these ones
right here would be uncharged so they're excuse me charged and you can see like here's a hydroxy group here's a hydroxy
group here's an amino and amino group and so that's why they're charged and so basically what is a protein a protein is
this huge three-dimensional structure that's made up of sometimes thousands of amino acids attached together and so why
do they look the way they do well the order of them is important and DNA holds that but once you have all those amino
acids attached together it'll basically look like this where you have all the backbone but on the side you're going to
have all your r or side chains and so basically once you build a polypeptide or a protein it's then going to fold
into a characteristic shape like this why is it going to do that well first of all they're going to be all these Alpha
helices and basically those are built on hydrogen bonds then all the Polar Polar side chains will fold to the outside of
the protein all the non-polar hide in the middle you'll have positive attached to negative and sometimes we refer to
this all as the tertiary structure and then the quatron structure would' be you know having more than one poly pipid
attached together but when you look at me you're looking at proteins and that proteins are all built of these monomers
which are amino acids next one then would be the lipids lipids basically there's one thing that ties those all
together there are a carbon a carbon a carbon a carbon a carbon a carbon a carbon a carbon a carbon a carbon and
then hydrogen around the outside so we call these things hydrocarbons and and so this would be a fatty acid but this
would be like a triglyceride it makes that burger that fatness of the burger really good this would be a phospholipid
and that would be inside the membranes of all living material or cholesterol you can see that hydrocarbon chain right
here these things are used for energy um but they also build up membranes one more important thing about them is that
they come in two different types saturated and unsaturated basically if you're saturated it means you're
straight because you have hydrogen around the whole thing if you're unsaturated you have a Double B bond in
the middle and so things like fat uh like butter animal fat are going to be saturated unsaturated things would be
like an olive oil because if they're bent they can't quite get next to each other and so they form a liquid at room
temperature um we can make them saturated by bubbling hydrogen through it and transforming that fat so you may
be heard of trans fats and then the last one is going to be carbohydrates carbohydrates actually come in three
different types we have monosaccharides the quintessential example is gluc we have disaccharides an example of that
would be sucrose and then we have these huge polysaccharides which are hundreds and hundreds and hundreds of glucose
molecules attached together or saccharide sugar molecules attached together um so basically when you're
eating a potato or when you're eating bread or when you're eating anything that has starch it is a bunch of sugar
molecules so there's one another another another and so they're all attached together using calent bonds and so if I
want to break down carbohydrates what do I I do well I have to snip that off hydrolysis break those into sugars and
then I can use them in cellular respiration and so those are the molecules of life again there's only
four of them but if you think back to that burger and how that burger eventually becomes you it's pretty cool
process and I hope that's helpful
Heads up!
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